Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952197.1_cds_XP_016491966.1_82229
CDS Infomation

[gene=LOC107811528] [db_xref=GeneID:107811528] [protein=pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like isoform X1] [protein_id=XP_016491966.1] [location=complement(17826..19247)] [gbkey=CDS]
Sequence

ATGCTTTCGTCTGTTATTTCTCGATATTCAACTTTCTTACCTTCTTCTTTGCTTCTCGCC
CAATTCGAAAACTTTCTTTTCCATCACGGTTATTACTCCACTCCCTCCAAACCCCAAAAT
CTCACTTCCTTTCCCAACTATGATGACCCAAATTCATCCCCACCTCTCAATCTTCCAGCC
AGTTCAACAAGTGCTTCCTTTGAATCCCTAAACCCCACCATCGTGCAGGAAACGCTCTCT
TGTTACAATAATGACTGGAGAAGAGCTTTAGAGTTCTTCAACTGGACTGAGACGCAGTGT
GGCTTCCAACACACCATCCAAACTTGCAACCAGCTTATTGACATTTTGGGCAAGTTTTTT
GAATTTGATGCAGCTTGGAATATGATTGAGAAAATGAGTAGTGTGCCCTCCATGCCCGAT
CACACCACCTTCCGGGTGTTATTCAAACGTTATGTGTCTGCTCACATGGTTAAAGAAGCA
ATTGATATGTTTGATAAGGCGGAGGAATTTAATTTAAGAGATCACATTTCATTTTCAAAT
CTAATTGATGCTCTATGTGAGTATAAGCATGTGATAGAGGCCGAAGAGTTGTGCTTCCCT
AAGAACAAGAATGATGTGAAGTATTCTTGTTTTAAAGTGGACACAAAAATATGTAATATG
CTTCTTCGTGGGTGGTTCAAAATGAGTTGGTGGGGGAAGTGTAGACAGTTTTGGGAAGAG
ATGGACACAAGGGGTGTGCAAAAGGATCTATATTCGTACTCTATTTACATGGATGTACAA
TGCAAGAGCGGAAAACCATGGAAAACTGTAAAATTATACAAAGAAATGAAGAAGAAGGGA
ATTGACTTGGATGTGATCGCGTATAACACTGTCATCCGTGCTATTGGGATTTCAGATGGT
GTTGATGTAGCAGCTAAGCTTTGTCAAGAGATGATTGAGTTGGGGTGCAAACCAAATGTT
TCTACATATAACACACTCATCAAGCTTATGTGTGAAAATGGGAGGTACAAAGACGCATAT
AGATTGCTTAATCAAATGCCTAGCAAGGGTTGCGAGCCTAATGTCATTACATACAACTGC
TTTTTTGGATGCCTTGGAAAGCCCAGAGAGATTCTCAAGTTGTTTGATAGAATGATCGAA
AGCGGAGTGCGGCCTAGGATGGACACTTATGTCATGCTTATGAGGAAATTTGGAAGATGG
GGATTTCTACGACCAGTCTTTATTCTTTGGGAAAAGATGGAAAAACAGGGGTTGAGTCCA
GATGTGTCTGCTTACAATGCATTAATTGACACGTTGGTGCAAAAGGGTATGGTTGATATG
GCACGCAAATATGATGAAGAGATGTTAGCAAGGGGCCTTTCAGCTAAGCCTAGGGTAGAA
CTGGGGACAAAGTTGACTAGTGCTGACTGTGGAAGCAGCTGA

Peptide Sequence

PEP ID

XP_016491966.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g80550, mitochondrial-like isoform X1 [Nicotiana tabacum]
Sequence

MLSSVISRYSTFLPSSLLLAQFENFLFHHGYYSTPSKPQNLTSFPNYDDPNSSPPLNLPA
SSTSASFESLNPTIVQETLSCYNNDWRRALEFFNWTETQCGFQHTIQTCNQLIDILGKFF
EFDAAWNMIEKMSSVPSMPDHTTFRVLFKRYVSAHMVKEAIDMFDKAEEFNLRDHISFSN
LIDALCEYKHVIEAEELCFPKNKNDVKYSCFKVDTKICNMLLRGWFKMSWWGKCRQFWEE
MDTRGVQKDLYSYSIYMDVQCKSGKPWKTVKLYKEMKKKGIDLDVIAYNTVIRAIGISDG
VDVAAKLCQEMIELGCKPNVSTYNTLIKLMCENGRYKDAYRLLNQMPSKGCEPNVITYNC
FFGCLGKPREILKLFDRMIESGVRPRMDTYVMLMRKFGRWGFLRPVFILWEKMEKQGLSP
DVSAYNALIDTLVQKGMVDMARKYDEEMLARGLSAKPRVELGTKLTSADCGSS

Transcript Sequence

Gene sequence data has not been registered.